All Classes and Interfaces
Class
Description
QuPath ImageServer that uses the Bio-Formats library to read image data.
A QuPath extension that adds options relating to the BioFormatsImageServer to the main QuPath preference pane.
Builder for ImageServers that make use of the Bio-Formats library.
Container for various options that can customize the behavior of the
BioFormatsImageServer.Allows command line option to convert an input image to OME-TIFF or OME-Zarr.
This class can parse raw bytes into a
BufferedImage.Builder for instances of
OMEPixelParser.Write OME-TIFF files based on QuPath ImageServers.
Builder class to define parameters when exporting an image region as OME-TIFF,
possibly as an image pyramid.
Enum representing different ways in which channels may be written to a file.
Preferred compression type when using Bio-Formats.
Class representing a single series to write to an OME-TIFF.
OME TIFF writer command capable of exporting image pyramids based on QuPath ImageServers.
ImageWriter for writing OME-TIFF images.An
ImageWriter for writing OME-zarr files.Create an OME-Zarr file writer as described by version 0.4 of the specifications of the
Next-generation file formats (NGFF).
Builder to create an instance of a
OMEZarrWriter.A GUI command to export the current ImageServer to an OME Zarr directory.