Package qupath.lib.algorithms
Class HaralickFeaturesPlugin
java.lang.Object
qupath.lib.plugins.AbstractPlugin<BufferedImage>
qupath.lib.plugins.AbstractInteractivePlugin<BufferedImage>
qupath.lib.algorithms.HaralickFeaturesPlugin
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qupath.lib.plugins.PathInteractivePlugin<BufferedImage>,qupath.lib.plugins.PathPlugin<BufferedImage>
public class HaralickFeaturesPlugin
extends qupath.lib.plugins.AbstractInteractivePlugin<BufferedImage>
Plugin for calculating Haralick texture features, within or around detections or tiles.
The ROIs of the detections can be used directly as masks, or else the textures can alternatively be calculated within square or circular regions around the object centroids. This latter option makes it possible to calculate a high density of tiles (for example), and then to compute textures at different resolutions independently of the tile size.
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Constructor Summary
Constructors -
Method Summary
Modifier and TypeMethodDescriptionprotected voidaddRunnableTasks(qupath.lib.images.ImageData<BufferedImage> imageData, qupath.lib.objects.PathObject parentObject, List<Runnable> tasks) qupath.lib.plugins.parameters.ParameterListgetDefaultParameterList(qupath.lib.images.ImageData<BufferedImage> imageData) getName()protected Collection<qupath.lib.objects.PathObject> getParentObjects(qupath.lib.images.ImageData<BufferedImage> imageData) Collection<Class<? extends qupath.lib.objects.PathObject>> Methods inherited from class qupath.lib.plugins.AbstractInteractivePlugin
alwaysPromptForObjects, getLoggableParameters, getParameterList, parseArgumentMethods inherited from class qupath.lib.plugins.AbstractPlugin
addWorkflowStep, getTasks, postprocess, preprocess, rearrangeByStride, requestHierarchyUpdate, runPluginMethods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, waitMethods inherited from interface qupath.lib.plugins.PathPlugin
runPlugin
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Constructor Details
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HaralickFeaturesPlugin
public HaralickFeaturesPlugin()Default constructor.
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Method Details
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addRunnableTasks
protected void addRunnableTasks(qupath.lib.images.ImageData<BufferedImage> imageData, qupath.lib.objects.PathObject parentObject, List<Runnable> tasks) - Specified by:
addRunnableTasksin classqupath.lib.plugins.AbstractPlugin<BufferedImage>
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getDefaultParameterList
public qupath.lib.plugins.parameters.ParameterList getDefaultParameterList(qupath.lib.images.ImageData<BufferedImage> imageData) - Specified by:
getDefaultParameterListin interfacequpath.lib.plugins.PathInteractivePlugin<BufferedImage>- Specified by:
getDefaultParameterListin classqupath.lib.plugins.AbstractInteractivePlugin<BufferedImage>
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getName
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getLastResultsDescription
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getDescription
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getParentObjects
protected Collection<qupath.lib.objects.PathObject> getParentObjects(qupath.lib.images.ImageData<BufferedImage> imageData) - Specified by:
getParentObjectsin classqupath.lib.plugins.AbstractPlugin<BufferedImage>
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getSupportedParentObjectClasses
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